Software Downloads
Software created in our laboratory and in the laboratory of Paul B. Manis for the acquisition and analysis of electrophysiologic data are available for download on this page. This software can be freely modified and distributed. Please notify Scott Molitor of any bugs or significant code alterations.
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Software |
Size |
Description |
Instructions |
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11 kB | Files for a Minitab workshop. | Unzip this archive. See Minitab text file for notes and instructions. |
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23 kB | Files for a Matlab workshop. See MATLABINTRO.M for an introduction to matrix arithmetic and manipulation. See MATLABTOPICS.M for information on data types, MEX files and GUIs. | Unzip this archive into a directory named C:\WORKSHOP. Enter cd c:\workshop from the MATLAB command prompt. |
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33 kB |
Simulation of Hodgkin-Huxley model currents under whole-cell voltage clamp for demonstrating the process of creating a Hodgkin-Huxley model of a voltage-gated ion channel. Requires MATLAB 6.5 or greater under Windows 2000 or XP. |
Unzip this archive into a directory named C:\HHMODEL. Enter cd c:\hhmodel and hhmodel from the MATLAB command prompt. |
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40 kB |
Simulation of single channel currents under tight-seal voltage clamp for demonstrating the process of creating a state-transition model of a voltage and/or ligand-gated ion channel. Requires MATLAB 6.5 or greater under Windows 2000 or XP. |
Unzip this archive into a directory named C:\SCMODEL. Enter cd c:\scmodel and scmodel from the MATLAB command prompt. |
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139 kB |
Routines for acquiring images from a PVCAM camera. Current version tested using MATLAB 7.5 and PVCAM 2.7.6 and may work with other MATLAB and PVCAM versions. Routines to control a Sutter Lambda 10-2 filter wheel via a RS232 serial port are included. |
Unzip this archive into a directory named MATPVCAM. This directory should then be added to the MATLAB path. Enter ANATSEQ, FLUOSEQ or PMTMODE from the MATLAB command prompt. |
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103 kB |
Software suite for reading and analyzing image data under
MATLAB 6.5 or greater. Capable of
reading TIFF stacks and AIF image files created by Axon Imaging Workbench 2.2
or lower. Provides filtering,
background subtraction, image arithmetic and profile analysis. |
Unzip this archive into a directory named AIFREAD. This directory should then be added to the
MATLAB path. Enter AIFSTART from the
MATLAB command prompt. Requires the
MATLAB Utilities package to run. |
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601 kB |
Various GUI utilities and other functions for MATLAB 6.5
or greater. Required for the AIF file
reader routines. |
Unzip this archive into a directory named UTILITIES. All subdirectories should then be added to the MATLAB path. |
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490 kB |
Software suite originally developed by Paul Manis for acquiring electrophysiologic data using the MATLAB data acquisition toolbox to control an NI A-D board. Current version tested using MATLAB 7.5 and NIDAQ 8.0 and may work with other MATLAB and NIDAQ versions that utilize NIDAQmx. |
Unzip this archive into a directory named MAT_DATAC. Operating instructions can be found in the
file ACQ.PDF. Note that various
subdirectories must be added to the MATLAB path for correct operation. |
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32 kB |
Code for Digital Optics V++ version 4.05 for high-speed
imaging using a Quantix 57 or other PVCAM camera. |
Unzip this archive.
Compile and Run the file STARTUP.V, which will create a toolbar for
acquiring images. |
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9 kB |
Code for Digital Optics V++ version 4.05 used to operate a
Sutter Lambda 10-2 filter wheel via the serial port. |
Compile and Run this VPascal file from V++. An icon bar containing various filter
wheel functions will appear. Commands
can be executed from other VPascal files via DDE; see code for details. |
Last updated 5/17/06